SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34839

Signal sequence   MLKQVTPLVLIAAVTA

Length  16

Organism  Shewanella sediminis (strain HAW-EB3)

UniProt ID  A8FW15,

Motif  1..16



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34839.cif

Structure  SPKB34839.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1668.11134

Aliphatic index  170.625

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  600.6

Aromaticity  0

Average rotatable bonds  3.3125

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  22

X logP energy  -2.7022

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.