SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34497

Signal sequence   MAVKHPAFRKKFPLLVTGSLLALQPAFSLQSFA

Length  33

Organism  Ectopseudomonas mendocina (strain ymp) (Pseudomonas mendocina)

UniProt ID  A4XZJ1,

Motif  1..33



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34497.cif

Structure  SPKB34497.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3615.38384

Aliphatic index  103.6363636

Isoelectric point  11.9245139

Charge (pH=7)   4.088004977

Topological polar surface area  1303.89

Aromaticity  0.121212121

Average rotatable bonds  3.484848485

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  46

X logP energy  -8.02133

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.