SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34169

Signal sequence   MATNKFFKSLLFTLTIAISSFGFCVENSSA

Length  30

Organism  Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)

UniProt ID  A0T0R9,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34169.cif

Structure  SPKB34169.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3275.82514

Aliphatic index  84.66666667

Isoelectric point  8.540504393

Charge (pH=7)   0.937194639

Topological polar surface area  1244.58

Aromaticity  0.166666667

Average rotatable bonds  3.566666667

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  46

X logP energy  -12.091

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.