SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33990

Signal sequence   MLMMFSPAFVMVMDLMVLVMMIMMMVSS

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  A0A1P8ATR9,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33990.cif

Structure  SPKB33990.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3248.30634

Aliphatic index  111.0714286

Isoelectric point  3.749987361

Charge (pH=7)   -1.001569216

Topological polar surface area  938.22

Aromaticity  0.071428571

Average rotatable bonds  3.892857143

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  44

X logP energy  0.6995

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.