SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33823

Signal sequence   MRSVFYVALVFAVLARSSTVAA

Length  22

Organism  Phytophthora nicotianae (strain INRA-310) (Phytophthora parasitica)

UniProt ID  W2PED7,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33823.cif

Structure  SPKB33823.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2358.82754

Aliphatic index  124.0909091

Isoelectric point  11.14762293

Charge (pH=7)   1.997127263

Topological polar surface area  899.37

Aromaticity  0.136363636

Average rotatable bonds  3.318181818

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  31

X logP energy  -6.87816

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.