SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33747

Signal sequence   MAIAERRSRSHLALRVRDRVSAEVFFEERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPKQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYDDIPKEITDPEAKKPEDWDDEEDGEWTAPTIPNPDYKGEWKPKKIKNPNFKGKWKAPMIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTMFDNVLICDDPDYAKKLAEETWGKNKDAEKAAFDEAEKKKEEEEAKDDPTESDDEKPDEEGESDGEGDDESKDIDNEEDDEDVHDEL

Length  100

Organism  Berberis stolonifera (Barberry)

UniProt ID  Q9ZPP1,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33747.cif

Structure  SPKB33747.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  47926.70254

Aliphatic index  53.70192308

Isoelectric point  4.256145715

Charge (pH=7)   -42.62123665

Topological polar surface area  20105

Aromaticity  0.105769231

Average rotatable bonds  2.403846154

Number of hydrogen bond donors  672

Number of hydrogen bond acceptors  672

X logP energy  -365.4447

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.