SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33657

Signal sequence   MERPFGCFFILLLISYTVVA

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9XIB6,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33657.cif

Structure  SPKB33657.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2319.84834

Aliphatic index  131.5

Isoelectric point  6.229383416

Charge (pH=7)   -0.063069019

Topological polar surface area  767.32

Aromaticity  0.2

Average rotatable bonds  3.55

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  28

X logP energy  -0.83003

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.