SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33518

Signal sequence   MANLSTLITIALLLCATMLTCSA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SZG4,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33518.cif

Structure  SPKB33518.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2368.94904

Aliphatic index  153.0434783

Isoelectric point  5.826007312

Charge (pH=7)   -0.125965132

Topological polar surface area  867.99

Aromaticity  0

Average rotatable bonds  3.347826087

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  35

X logP energy  -7.7387

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.