SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33514

Signal sequence   MGKCSALMIFLSSSLLLVLQTLHVVNA

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SYS3,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33514.cif

Structure  SPKB33514.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2889.56594

Aliphatic index  155.1851852

Isoelectric point  8.552755748

Charge (pH=7)   1.026623641

Topological polar surface area  1061.95

Aromaticity  0.037037037

Average rotatable bonds  3.592592593

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  40

X logP energy  -7.7245

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.