SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33508

Signal sequence   MMHSSSVRRMITVKWSLCLIFCLTNSILVSA

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SVN2,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33508.cif

Structure  SPKB33508.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3528.32624

Aliphatic index  119.3548387

Isoelectric point  9.915305617

Charge (pH=7)   2.964642302

Topological polar surface area  1335.54

Aromaticity  0.064516129

Average rotatable bonds  3.774193548

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  50

X logP energy  -11.44936

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.