SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33452

Signal sequence   MDLLFLFFSLLLSYLFFKIWKLIDS

Length  25

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SIB2,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33452.cif

Structure  SPKB33452.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3113.83404

Aliphatic index  156

Isoelectric point  6.440547229

Charge (pH=7)   -0.002563214

Topological polar surface area  985.07

Aromaticity  0.28

Average rotatable bonds  4.04

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  35

X logP energy  3.3177

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.