SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33440

Signal sequence   MDYSFLLIILLLTISTSCCA

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SFB5,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33440.cif

Structure  SPKB33440.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2220.72544

Aliphatic index  161

Isoelectric point  3.749955142

Charge (pH=7)   -1.126369063

Topological polar surface area  774.9

Aromaticity  0.1

Average rotatable bonds  3.55

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  31

X logP energy  -3.9849

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.