SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33434

Signal sequence   MGSKPNAMKNVVAMAAVSALFLLGFLVCSVSG

Length  32

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SCW1,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33434.cif

Structure  SPKB33434.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3213.92064

Aliphatic index  109.6875

Isoelectric point  9.676237541

Charge (pH=7)   1.935419516

Topological polar surface area  1175.77

Aromaticity  0.0625

Average rotatable bonds  3.28125

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  45

X logP energy  -10.9561

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.