SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33427

Signal sequence   MSKSSRIRMKSRTRYLIAILLVISLCSKASS

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9SCU8,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33427.cif

Structure  SPKB33427.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3500.28364

Aliphatic index  116.4516129

Isoelectric point  12.1066109

Charge (pH=7)   6.934260822

Topological polar surface area  1464.28

Aromaticity  0.032258065

Average rotatable bonds  4

Number of hydrogen bond donors  58

Number of hydrogen bond acceptors  52

X logP energy  -15.84952

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.