SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33408

Signal sequence   MTDPDSTSPAPDPQQPADPQPTDPGRREVLRQGALLTATALGLGGGLTLLTRRPAPA

Length  57

Organism  Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)

UniProt ID  Q9RRF6,

Motif  1..57



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33408.cif

Structure  SPKB33408.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5844.55654

Aliphatic index  72.10526316

Isoelectric point  4.678259477

Charge (pH=7)   -0.998024714

Topological polar surface area  2492.75

Aromaticity  0

Average rotatable bonds  3.105263158

Number of hydrogen bond donors  82

Number of hydrogen bond acceptors  83

X logP energy  -32.41845

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.