SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33251

Signal sequence   MVPTRNRPMLRILGFFICAAFIYL

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9M0H6,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33251.cif

Structure  SPKB33251.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2843.54834

Aliphatic index  117.9166667

Isoelectric point  11.05979695

Charge (pH=7)   2.935149235

Topological polar surface area  984.29

Aromaticity  0.166666667

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  34

X logP energy  -2.67669

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.