SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33248

Signal sequence   MKDQLGFRIVLCSAVFIILTQNRALA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LZV3,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33248.cif

Structure  SPKB33248.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2921.55534

Aliphatic index  138.8461538

Isoelectric point  9.828249571

Charge (pH=7)   1.936154411

Topological polar surface area  1147.67

Aromaticity  0.076923077

Average rotatable bonds  3.807692308

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  38

X logP energy  -8.07786

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.