SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33242

Signal sequence   MSLSSRATLVVLCCLFMLIPSFTTA

Length  25

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LYS9,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33242.cif

Structure  SPKB33242.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2705.34274

Aliphatic index  124.8

Isoelectric point  8.231408964

Charge (pH=7)   0.874031556

Topological polar surface area  956.44

Aromaticity  0.08

Average rotatable bonds  3.4

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  38

X logP energy  -7.60583

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.