SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33227

Signal sequence   MMQFHFQFYVGPVFTLRPSKGFLSTCLVSFLFVTTTFC

Length  38

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LVM0,

Motif  1..38



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33227.cif

Structure  SPKB33227.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4429.29624

Aliphatic index  71.57894737

Isoelectric point  8.801024153

Charge (pH=7)   1.963795199

Topological polar surface area  1507.29

Aromaticity  0.236842105

Average rotatable bonds  3.552631579

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  57

X logP energy  -8.55483

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.