SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33223

Signal sequence   MTHAREWRSSLTTTLLMVILLSYMLHLFCVYSRVG

Length  35

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LUA1,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33223.cif

Structure  SPKB33223.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4129.97074

Aliphatic index  116.8571429

Isoelectric point  9.326879331

Charge (pH=7)   2.117892126

Topological polar surface area  1551.17

Aromaticity  0.114285714

Average rotatable bonds  3.8

Number of hydrogen bond donors  60

Number of hydrogen bond acceptors  56

X logP energy  -9.99939

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.