SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33214

Signal sequence   MVSKPLFSLLLLTVALVVFQTGTLVNA

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LSP9,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33214.cif

Structure  SPKB33214.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2875.54634

Aliphatic index  162.2222222

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  1024.48

Aromaticity  0.074074074

Average rotatable bonds  3.407407407

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  37

X logP energy  -5.5814

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.