SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33212

Signal sequence   MNLTLPMKKQKFLLIISLLILLSLLHQDYHIEA

Length  33

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LSM9,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33212.cif

Structure  SPKB33212.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3891.81544

Aliphatic index  168.4848485

Isoelectric point  9.225054544

Charge (pH=7)   1.180288572

Topological polar surface area  1405.94

Aromaticity  0.060606061

Average rotatable bonds  4.060606061

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  50

X logP energy  -3.7895

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.