SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33196

Signal sequence   MSRSLALVYLSLLCLQTHLSIS

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LK37,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33196.cif

Structure  SPKB33196.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2448.96464

Aliphatic index  159.5454545

Isoelectric point  8.534796248

Charge (pH=7)   1.026064949

Topological polar surface area  949.7

Aromaticity  0.045454545

Average rotatable bonds  3.681818182

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -7.90813

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.