SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33183

Signal sequence   MPRVHHSLSNQAFLVLLLFSSIASA

Length  25

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LFD1,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33183.cif

Structure  SPKB33183.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2739.23094

Aliphatic index  128.8

Isoelectric point  10.55350111

Charge (pH=7)   1.17979917

Topological polar surface area  1059.52

Aromaticity  0.08

Average rotatable bonds  3.48

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  37

X logP energy  -9.27623

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.