SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33176

Signal sequence   MCLQNLLSILCFVLAISFGYVSA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LDS6,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33176.cif

Structure  SPKB33176.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2506.07424

Aliphatic index  152.6086957

Isoelectric point  5.824052577

Charge (pH=7)   -0.126815547

Topological polar surface area  870.62

Aromaticity  0.130434783

Average rotatable bonds  3.47826087

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -4.466

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.