SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33173

Signal sequence   MCLNTLCAILCFVLTVSFGFVSA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LDM5,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33173.cif

Structure  SPKB33173.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2453.02874

Aliphatic index  131.3043478

Isoelectric point  5.759310256

Charge (pH=7)   -0.187939848

Topological polar surface area  827.53

Aromaticity  0.130434783

Average rotatable bonds  3.304347826

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -5.1742

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.