SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33106

Signal sequence   MASHKWLLQMIVFLKTITIAYC

Length  22

Organism  Varicella-zoster virus (strain Oka vaccine) (HHV-3) (Human herpesvirus 3)

UniProt ID  Q9J3N1,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33106.cif

Structure  SPKB33106.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2611.26004

Aliphatic index  128.6363636

Isoelectric point  9.407025159

Charge (pH=7)   2.025478192

Topological polar surface area  894.94

Aromaticity  0.136363636

Average rotatable bonds  3.863636364

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -1.8543

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.