SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB33105

Signal sequence   MYGIEYTTVLTFLISFILLNYILKSLTIMMDFIIYRFLFIIVVLPPLLNA

Length  50

Organism  Rotavirus A (isolate RVA/Equine/Japan/HO-5/1980/G3P[X]) (RV-A)

UniProt ID  Q9IPD4,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB33105.cif

Structure  SPKB33105.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5905.32064

Aliphatic index  167.6

Isoelectric point  6.468303987

Charge (pH=7)   -0.003494096

Topological polar surface area  1922.64

Aromaticity  0.18

Average rotatable bonds  3.76

Number of hydrogen bond donors  67

Number of hydrogen bond acceptors  70

X logP energy  0.91747

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.