SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32987

Signal sequence   MATLRFTLLLLVFVVGIFFSFSSVSHVRA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FYL8,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32987.cif

Structure  SPKB32987.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3258.95884

Aliphatic index  137.5862069

Isoelectric point  12.50011018

Charge (pH=7)   2.088886768

Topological polar surface area  1151.98

Aromaticity  0.172413793

Average rotatable bonds  3.551724138

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  40

X logP energy  -5.60976

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.