SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32972

Signal sequence   MNRVTTESIASTAILVVMVFLFSWRSIEA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FN08,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32972.cif

Structure  SPKB32972.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3272.86854

Aliphatic index  117.5862069

Isoelectric point  6.533466308

Charge (pH=7)   0.001527922

Topological polar surface area  1277.01

Aromaticity  0.103448276

Average rotatable bonds  3.655172414

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  44

X logP energy  -10.15436

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.