SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32971

Signal sequence   MADNRRRRSLFDFLLFSVFLGLACLCLSPIPATA

Length  34

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FMK9,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32971.cif

Structure  SPKB32971.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3815.57084

Aliphatic index  112.0588235

Isoelectric point  8.83464883

Charge (pH=7)   1.874914591

Topological polar surface area  1452.25

Aromaticity  0.117647059

Average rotatable bonds  3.558823529

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  49

X logP energy  -11.03602

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.