SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32907

Signal sequence   MSRLALNRYSRCFSRLKTLTTPLFFSSSAA

Length  30

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9FG08,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32907.cif

Structure  SPKB32907.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3426.01494

Aliphatic index  75

Isoelectric point  12.059017

Charge (pH=7)   4.93485089

Topological polar surface area  1417.44

Aromaticity  0.133333333

Average rotatable bonds  3.7

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  49

X logP energy  -16.23312

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.