SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32868

Signal sequence   MSIRTSIALIGILFAISIYTVLLVVYVSTLS

Length  31

Organism  Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1)

UniProt ID  Q9E6M3,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32868.cif

Structure  SPKB32868.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3358.12354

Aliphatic index  182.2580645

Isoelectric point  9.17162813

Charge (pH=7)   0.99628016

Topological polar surface area  1200.52

Aromaticity  0.096774194

Average rotatable bonds  3.483870968

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  44

X logP energy  -5.99583

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.