SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32854

Signal sequence   MDVSSKVVVQVLLLALVVQVTLC

Length  23

Organism  Oryzias latipes (Japanese rice fish) (Japanese killifish)

UniProt ID  Q9DD49,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32854.cif

Structure  SPKB32854.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2457.06884

Aliphatic index  190

Isoelectric point  6.160569088

Charge (pH=7)   -0.063838966

Topological polar surface area  913.71

Aromaticity  0

Average rotatable bonds  3.565217391

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -5.2547

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.