SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32644

Signal sequence   MATPLQPFLTKTHKQNPIIGFNILTFVVTLFVALFLVVFLVAPYQFEIKHSNLCKTAQDSQLCLSYVSEIVTTESDGVTVLKKFLVKYVHQMNNAIPVVRKIKNQINDIRQQGALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPNDEVLRQGLGKMPYWVSSRDRKLMESSGKDIIANRVVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDGSTFPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGLVE

Length  100

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  Q96576,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32644.cif

Structure  SPKB32644.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  60249.03854

Aliphatic index  90.27573529

Isoelectric point  8.182983915

Charge (pH=7)   3.344191502

Topological polar surface area  24638.6

Aromaticity  0.084558824

Average rotatable bonds  1.838235294

Number of hydrogen bond donors  853

Number of hydrogen bond acceptors  837

X logP energy  -509.20826

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.