SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB32543

Signal sequence   MRAERWSQTVRQIRSPRALRVIPLTALMLISG

Length  32

Organism  Pseudomonas putida (strain DOT-T1E)

UniProt ID  Q93PU5,

Motif  1..32



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB32543.cif

Structure  SPKB32543.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3707.46304

Aliphatic index  112.8125

Isoelectric point  12.8010505

Charge (pH=7)   4.999739554

Topological polar surface area  1559.66

Aromaticity  0.03125

Average rotatable bonds  3.84375

Number of hydrogen bond donors  58

Number of hydrogen bond acceptors  49

X logP energy  -14.29058

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.