SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB31778

Signal sequence   MPVFPFCRPMTCAGLAAALVAFSVGVQA

Length  28

Organism  Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

UniProt ID  Q88IU8,

Motif  1..28



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB31778.cif

Structure  SPKB31778.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2855.48524

Aliphatic index  90.71428571

Isoelectric point  8.231408964

Charge (pH=7)   0.874031556

Topological polar surface area  968.1

Aromaticity  0.107142857

Average rotatable bonds  2.964285714

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  37

X logP energy  -6.89933

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.