SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB31771

Signal sequence   MFFRPDFRPRCAKWLIATGLFLMLGACVE

Length  29

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q886W7,

Motif  1..29



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB31771.cif

Structure  SPKB31771.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3390.14664

Aliphatic index  87.5862069

Isoelectric point  8.827928922

Charge (pH=7)   1.875951507

Topological polar surface area  1182.88

Aromaticity  0.172413793

Average rotatable bonds  3.655172414

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  41

X logP energy  -4.10619

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.