SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB31617

Signal sequence   MYSTECTILLIEIIFYFFAAVVVYDAIHKMANSPIFCIAVLAVVFAVSPKCFA

Length  53

Organism  Rotavirus A (isolate RVA/Cow/Germany/993/1983/G18P[17]) (RV-A)

UniProt ID  Q80IG9,

Motif  1..53



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB31617.cif

Structure  SPKB31617.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5895.14794

Aliphatic index  126.9811321

Isoelectric point  5.541691315

Charge (pH=7)   -1.096175338

Topological polar surface area  1956.49

Aromaticity  0.169811321

Average rotatable bonds  3.433962264

Number of hydrogen bond donors  70

Number of hydrogen bond acceptors  74

X logP energy  -5.5288

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.