SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB31217

Signal sequence   MSRVQCLRLAAVIASISHLIFLVWFVCWNSVLE

Length  33

Organism  Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus)

UniProt ID  Q6UDM3,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB31217.cif

Structure  SPKB31217.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3805.61854

Aliphatic index  147.5757576

Isoelectric point  8.242962328

Charge (pH=7)   0.966712459

Topological polar surface area  1382.98

Aromaticity  0.121212121

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  47

X logP energy  -6.36626

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.