SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB31213

Signal sequence   MPAATMATPGYLACRTSVATLLFFVLLRRA

Length  30

Organism  Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus)

UniProt ID  Q6UDF6,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB31213.cif

Structure  SPKB31213.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3242.94984

Aliphatic index  104.3333333

Isoelectric point  11.05979695

Charge (pH=7)   2.935149235

Topological polar surface area  1196.72

Aromaticity  0.1

Average rotatable bonds  3.3

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  43

X logP energy  -9.06179

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.