SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB31116

Signal sequence   MYGIEYTTVLTFLISVILLNYVLKSLTRIMDFIIYRFLLIIVILSPLLDA

Length  50

Organism  Rotavirus A (strain RVA/Human/United States/M/1976/G3P[X]) (RV-A)

UniProt ID  Q6L5Y4,

Motif  1..50



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB31116.cif

Structure  SPKB31116.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5839.20064

Aliphatic index  181.2

Isoelectric point  6.52956392

Charge (pH=7)   -0.003050923

Topological polar surface area  2007.77

Aromaticity  0.14

Average rotatable bonds  3.8

Number of hydrogen bond donors  72

Number of hydrogen bond acceptors  71

X logP energy  -2.27026

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.