SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30995

Signal sequence   MGNKRIKAMMILVVMIMMVFSWRICEA

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q6DUW8,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30995.cif

Structure  SPKB30995.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3203.12444

Aliphatic index  111.8518519

Isoelectric point  10.77794737

Charge (pH=7)   2.937188016

Topological polar surface area  1112.17

Aromaticity  0.074074074

Average rotatable bonds  4.111111111

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  42

X logP energy  -3.19506

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.