SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30994

Signal sequence   MSSRSHRSRKYQLTRTIPILVLLLVLLSCCNG

Length  32

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q6DUW7,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30994.cif

Structure  SPKB30994.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3659.43074

Aliphatic index  127.8125

Isoelectric point  11.36214098

Charge (pH=7)   4.963785265

Topological polar surface area  1506.95

Aromaticity  0.03125

Average rotatable bonds  3.84375

Number of hydrogen bond donors  58

Number of hydrogen bond acceptors  52

X logP energy  -15.13552

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.