SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30947

Signal sequence   MIPNRKIQLSLFAVIIVFETLLNQVYA

Length  27

Organism  Gracilaria tenuistipitata var. liui (Red alga)

UniProt ID  Q6B942,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30947.cif

Structure  SPKB30947.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3134.81374

Aliphatic index  155.1851852

Isoelectric point  9.297359792

Charge (pH=7)   0.998610663

Topological polar surface area  1169.4

Aromaticity  0.111111111

Average rotatable bonds  3.814814815

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  39

X logP energy  -5.01533

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.