SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30927

Signal sequence   MKAVATVFICGSLVLITYLPLVVTSPQTLA

Length  30

Organism  Rattus norvegicus (Rat)

UniProt ID  Q6AXW8,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30927.cif

Structure  SPKB30927.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3149.88134

Aliphatic index  149.3333333

Isoelectric point  8.522939048

Charge (pH=7)   0.934864135

Topological polar surface area  1100.36

Aromaticity  0.066666667

Average rotatable bonds  3.233333333

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  42

X logP energy  -6.4601

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.