SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30817

Signal sequence   MGSITASFILITMQILFFCEDSSG

Length  24

Organism  Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3)

UniProt ID  Q65ZG0,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30817.cif

Structure  SPKB30817.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2612.06584

Aliphatic index  101.6666667

Isoelectric point  3.550065871

Charge (pH=7)   -2.06176881

Topological polar surface area  971.69

Aromaticity  0.125

Average rotatable bonds  3.583333333

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  37

X logP energy  -8.3921

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.