SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30721

Signal sequence   MAVSSSTSTCSSFSLLLLLLLLAA

Length  24

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q60DX8,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30721.cif

Structure  SPKB30721.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2428.92504

Aliphatic index  154.5833333

Isoelectric point  5.922539791

Charge (pH=7)   -0.063990417

Topological polar surface area  914.69

Aromaticity  0.041666667

Average rotatable bonds  3.291666667

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  36

X logP energy  -9.7335

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.