SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30711

Signal sequence   MDVHTRWKDRLPVGPAAVPPLLLLLLLLWAPPQSRA

Length  36

Organism  Cricetulus longicaudatus (Long-tailed dwarf hamster)

UniProt ID  Q60467,

Motif  1..36



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30711.cif

Structure  SPKB30711.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4041.90284

Aliphatic index  132.7777778

Isoelectric point  11.37807858

Charge (pH=7)   2.089481391

Topological polar surface area  1459.21

Aromaticity  0.055555556

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  48

X logP energy  -5.82889

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.