SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB30685

Signal sequence   MLNKSFAMYVYVQQFHRDMPPTPVFVYGQSLQTATFPGPTIVARYNVPLYVTWENHLPDAHILPWDPTVPTAIPKNGGVPTVVHLHGAAQAPDSDGHAFAWFTRDFAENGSTWTQKTYTYPNVQPAAGNIWYHDHALGLTRASLLAGLLAAYIVEWPELEMPFNLPSGEFDLHLVIADRKFNVDGTIFMDTVGAVPSVHPQWQPEYFGEVITVNGKAWPFQAVQRRRYRLRILNASNARYLNIRFSNGLPFTVIASDATYLSRPVTVSNLLLSPAEIFDVIVDFSLVVNPNATDIELLNSAPYPFPTGTPANATLDGKVMAFNVSAKWQVGDDMPMQEPENSTVVPEIGVPFAKVTALPPTMKTRYIVLYENMTSNDPNTAKTMNLYINGLRLEDPPTETPISGTTELWHVINLTPDNHPLHLHLAEFQAVQMLQLVDPDTFKSCMLKHNDTFACNLDQHAVGALQPVPEEEKTWKNVVKIPPAYVTSVVVAFRLVHNNMPYPFDATAAPGYVYHCHILDHEDNAMIRPLTLLP

Length  100

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q5ZE00,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB30685.cif

Structure  SPKB30685.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  59633.03084

Aliphatic index  86.53558052

Isoelectric point  5.731089953

Charge (pH=7)   -16.34054427

Topological polar surface area  23111.43

Aromaticity  0.106741573

Average rotatable bonds  1.872659176

Number of hydrogen bond donors  769

Number of hydrogen bond acceptors  791

X logP energy  -466.39281

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.